South Big Data Hub/DataUP/Georgia Tech are sponsoring a Data Carpentry Genomics workshop with IDI-BD2K in Rio Piedras August 17-18, 2018.
Genomics Project Organization
- Data tidiness
- Planning NGS Projects
- Examining Data on NCBI SRA database
The Unix Shell
- Files and directories
- Pipes and redirection
- Creating and running shell scripts
- Organizing bioinformatics projects
Wrangling Genomics Data
- Assessing Read Quality
- Trimming and Filtering Reads
- Variant Calling
- Automation
Cloud computing
- What is the cloud
- Logging into the cloud
- Setting up your environment
- Moving data and results to and from the cloud
See the course page for details and registration: